Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN06297358_1973 | Not Available | Negative | 2315681 - 2316445 | 28874.2 |
| hypothetical protein | SAMN06297358_1974 | Not Available | Negative | 2316644 - 2317090 | 16356.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06297358_1975 | Not Available | Negative | 2317174 - 2317932 | 27597.3 |
| probable protein-translocating porin port | SAMN06297358_1976 | Not Available | Negative | 2317982 - 2318743 | 28692.4 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN06297358_1977 | Not Available | Negative | 2318740 - 2319468 | 27352.9 |
| gtp-binding protein | SAMN06297358_1978 | Not Available | Positive | 2319588 - 2320235 | 24455.5 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN06297358_1979 | Not Available | Positive | 2320269 - 2321126 | 32090.6 |
| kup system potassium uptake protein | SAMN06297358_1980 | Not Available | Negative | 2321360 - 2323330 | 73721.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1981 | Not Available | Positive | 2323525 - 2324037 | 18812.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06297358_1982 | Not Available | Positive | 2324134 - 2324745 | 23020.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

