Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | SAMN06297358_1963 | Not Available | Negative | 2305271 - 2307172 | 71874.2 |
| hypothetical protein | SAMN06297358_1964 | Not Available | Negative | 2307341 - 2307796 | 17383.0 |
| glutamate racemase | SAMN06297358_1965 | Not Available | Negative | 2307799 - 2308629 | 30558.5 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06297358_1966 | Not Available | Negative | 2308684 - 2309271 | 21175.3 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06297358_1967 | Not Available | Negative | 2309372 - 2309902 | 20272.6 |
| beta-barrel assembly machine subunit bama | SAMN06297358_1968 | Not Available | Negative | 2309950 - 2312493 | 95518.4 |
| undecaprenyl diphosphate synthase | SAMN06297358_1969 | Not Available | Negative | 2312557 - 2313297 | 28333.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_1970 | Not Available | Negative | 2313323 - 2314123 | 29930.1 |
| nad+ kinase | SAMN06297358_1971 | Not Available | Negative | 2314125 - 2315006 | 32448.0 |
| cbs domain-containing protein | SAMN06297358_1972 | Not Available | Negative | 2315014 - 2315676 | 24868.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

