Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN06297358_1952 | Not Available | Positive | 2291328 - 2293616 | 86508.4 |
| protein of unknown function | SAMN06297358_1954 | Not Available | Positive | 2294346 - 2295029 | 26817.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN06297358_1955 | Not Available | Positive | 2295058 - 2296383 | 48214.1 |
| dolichol-phosphate mannosyltransferase | SAMN06297358_1956 | Not Available | Positive | 2296704 - 2297402 | 26493.9 |
| protein of unknown function, duf288 | SAMN06297358_1957 | Not Available | Positive | 2297427 - 2298428 | 38400.8 |
| hypothetical protein | SAMN06297358_1958 | Not Available | Positive | 2298433 - 2299707 | 48475.7 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN06297358_1959 | Not Available | Positive | 2299815 - 2300831 | 39171.0 |
| protein of unknown function | SAMN06297358_1960 | Not Available | Negative | 2300893 - 2303448 | 93494.9 |
| dna polymerase iii, delta subunit | SAMN06297358_1961 | Not Available | Negative | 2303571 - 2304590 | 38690.7 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN06297358_1962 | Not Available | Positive | 2304686 - 2305147 | 17850.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

