Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01879 | SAMN06297358_1942 | Not Available | Negative | 2281217 - 2281798 | Not Available |
| glycosyl transferases group 1 | SAMN06297358_1943 | Not Available | Positive | 2281975 - 2283198 | 46884.1 |
| hypothetical protein | SAMN06297358_1944 | Not Available | Positive | 2283235 - 2283582 | 13032.3 |
| molecular chaperone hsca | SAMN06297358_1945 | Not Available | Positive | 2283657 - 2285516 | 67601.6 |
| predicted zn-dependent protease | SAMN06297358_1946 | Not Available | Positive | 2286019 - 2287314 | 48898.3 |
| hypothetical protein | SAMN06297358_1947 | Not Available | Positive | 2287319 - 2287846 | 19586.0 |
| putative membrane protein | SAMN06297358_1948 | Not Available | Positive | 2287846 - 2289360 | 57144.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN06297358_1949 | Not Available | Positive | 2289411 - 2289824 | 15691.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06297358_1950 | Not Available | Positive | 2290083 - 2290721 | 24438.2 |
| hypothetical protein | SAMN06297358_1951 | Not Available | Negative | 2290811 - 2291134 | 12224.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

