Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1932 | Not Available | Positive | 2271905 - 2272294 | 14551.7 |
| septum formation protein | SAMN06297358_1933 | Not Available | Positive | 2272446 - 2273012 | 21165.5 |
| bnr repeat-like domain-containing protein | SAMN06297358_1934 | Not Available | Negative | 2273009 - 2274181 | 43959.5 |
| hypothetical protein | SAMN06297358_1935 | Not Available | Negative | 2274181 - 2274585 | 15520.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06297358_1936 | Not Available | Negative | 2274605 - 2276455 | 69266.5 |
| gliding motility-associated protein gldc | SAMN06297358_1937 | Not Available | Negative | 2276473 - 2276808 | 13018.5 |
| hypothetical protein | SAMN06297358_1938 | Not Available | Negative | 2276841 - 2277122 | 10540.8 |
| atp-dependent rna helicase rhle | SAMN06297358_1939 | Not Available | Negative | 2277124 - 2278437 | 49339.0 |
| dihydroorotase | SAMN06297358_1940 | Not Available | Positive | 2278749 - 2280083 | 49011.5 |
| protein of unknown function | SAMN06297358_1941 | Not Available | Positive | 2280083 - 2281159 | 41724.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

