Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | SAMN06297358_0178 | Not Available | Positive | 201050 - 202303 | 47694.8 |
| beta-glucosidase | SAMN06297358_0179 | Not Available | Positive | 202318 - 204699 | 88127.6 |
| hexosaminidase | SAMN06297358_0180 | Not Available | Positive | 204761 - 206404 | 62197.5 |
| nagd protein | SAMN06297358_0181 | Not Available | Negative | 206605 - 207390 | 28536.7 |
| stress responsive a/b barrel domain | SAMN06297358_0182 | Not Available | Negative | 207431 - 207727 | 11240.5 |
| hypothetical protein | SAMN06297358_0183 | Not Available | Positive | 207932 - 208330 | 14919.1 |
| copper chaperone copz | SAMN06297358_0184 | Not Available | Positive | 208534 - 208917 | 14047.1 |
| heavy metal efflux pump, czca family | SAMN06297358_0185 | Not Available | Positive | 209048 - 210340 | 47850.3 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN06297358_0186 | Not Available | Positive | 210580 - 212517 | 71906.8 |
| outer membrane protein tolc | SAMN06297358_0187 | Not Available | Positive | 212504 - 214003 | 56994.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

