Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1911 | Not Available | Negative | 2253346 - 2253555 | 7673.75 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06297358_1912 | Not Available | Positive | 2253693 - 2254349 | 24407.7 |
| dna-3-methyladenine glycosylase i | SAMN06297358_1913 | Not Available | Positive | 2254554 - 2255105 | 21052.1 |
| cation/acetate symporter | SAMN06297358_1914 | Not Available | Negative | 2255218 - 2257131 | 68469.6 |
| protein of unknown function, duf485 | SAMN06297358_1915 | Not Available | Negative | 2257121 - 2257423 | 11338.7 |
| cysteine desulfurase | SAMN06297358_1917 | Not Available | Negative | 2258057 - 2259205 | 41943.3 |
| phosphomannomutase | SAMN06297358_1918 | Not Available | Negative | 2259295 - 2260734 | 52155.6 |
| methyltransferase domain-containing protein | SAMN06297358_1919 | Not Available | Positive | 2261074 - 2261805 | 28883.6 |
| undecaprenyl-diphosphatase | SAMN06297358_1920 | Not Available | Positive | 2261802 - 2262392 | 22389.0 |
| zinc transporter zupt | SAMN06297358_1921 | Not Available | Positive | 2262450 - 2263172 | 26606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

