Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease protein | SAMN06297358_1901 | Not Available | Positive | 2240861 - 2241964 | 41836.6 |
| hypothetical protein | SAMN06297358_1902 | Not Available | Positive | 2242279 - 2242767 | 18712.5 |
| hypothetical protein | SAMN06297358_1903 | Not Available | Positive | 2243897 - 2246671 | 106418.0 |
| protein of unknown function | SAMN06297358_1904 | Not Available | Positive | 2246692 - 2246976 | 10427.6 |
| nicotine adenine dinucleotide glycohydrolase (nadase) | SAMN06297358_1905 | Not Available | Positive | 2247104 - 2247871 | 28651.4 |
| putative lumazine-binding | SAMN06297358_1906 | Not Available | Positive | 2247935 - 2248384 | 17322.0 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN06297358_1907 | Not Available | Positive | 2248397 - 2248852 | 16874.6 |
| peptidase family m28 | SAMN06297358_1908 | Not Available | Positive | 2248934 - 2250481 | 57120.1 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN06297358_1909 | Not Available | Negative | 2250749 - 2251753 | 37706.1 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN06297358_1910 | Not Available | Negative | 2251753 - 2253075 | 49024.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

