Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1889 | Not Available | Negative | 2228978 - 2229589 | 23779.3 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN06297358_1890 | Not Available | Negative | 2229594 - 2231222 | 59094.3 |
| hypothetical protein | SAMN06297358_1891 | Not Available | Positive | 2231399 - 2232109 | 27792.9 |
| cystathionine beta-synthase | SAMN06297358_1892 | Not Available | Negative | 2232455 - 2233816 | 49919.7 |
| dna processing protein | SAMN06297358_1893 | Not Available | Negative | 2234120 - 2235214 | 40126.9 |
| predicted transcriptional regulator | SAMN06297358_1894 | Not Available | Positive | 2235323 - 2235691 | 14242.3 |
| blar1 peptidase m56 | SAMN06297358_1895 | Not Available | Positive | 2235691 - 2237463 | 67048.1 |
| 16s rrna m(7)g-527 methyltransferase | SAMN06297358_1896 | Not Available | Negative | 2237471 - 2238100 | 23879.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN06297358_1897 | Not Available | Negative | 2238208 - 2239329 | 42929.9 |
| queuine trna-ribosyltransferase | SAMN06297358_1900 | Not Available | Positive | 2239730 - 2240860 | 42441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

