Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1879 | Not Available | Negative | 2218938 - 2219441 | 19096.1 |
| hypothetical protein | SAMN06297358_1880 | Not Available | Negative | 2219442 - 2219948 | 19409.4 |
| proton glutamate symport protein | SAMN06297358_1881 | Not Available | Negative | 2219954 - 2221375 | 51248.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1882 | Not Available | Positive | 2221678 - 2222175 | 19609.5 |
| hypothetical protein | SAMN06297358_1883 | Not Available | Positive | 2222162 - 2222758 | 23235.8 |
| hypothetical protein | SAMN06297358_1884 | Not Available | Positive | 2222790 - 2223329 | 20990.8 |
| hypothetical protein | SAMN06297358_1885 | Not Available | Negative | 2223739 - 2224344 | 22468.8 |
| hexosaminidase | SAMN06297358_1886 | Not Available | Negative | 2224399 - 2226318 | 71681.0 |
| thioredoxin reductase (nadph) | SAMN06297358_1887 | Not Available | Negative | 2226498 - 2227454 | 34471.8 |
| membrane dipeptidase | SAMN06297358_1888 | Not Available | Negative | 2227768 - 2228892 | 40850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

