Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitinase b | SAMN06297358_1869 | Not Available | Negative | 2206628 - 2207614 | 35096.5 |
| acetyl esterase/lipase | SAMN06297358_1870 | Not Available | Negative | 2207658 - 2208524 | 31463.0 |
| cupin domain-containing protein | SAMN06297358_1871 | Not Available | Negative | 2208645 - 2208980 | 12599.1 |
| alginate lyase | SAMN06297358_1872 | Not Available | Negative | 2209051 - 2211183 | 79061.2 |
| transcriptional regulator, gntr family | SAMN06297358_1873 | Not Available | Negative | 2211238 - 2211981 | 27498.2 |
| sialate o-acetylesterase | SAMN06297358_1874 | Not Available | Negative | 2212074 - 2214023 | 72260.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1875 | Not Available | Negative | 2214100 - 2216652 | 88546.1 |
| hypothetical protein | SAMN06297358_1876 | Not Available | Negative | 2216715 - 2217569 | 30166.7 |
| polysaccharide lyase | SAMN06297358_1877 | Not Available | Negative | 2217588 - 2218466 | 33406.5 |
| hypothetical protein | SAMN06297358_1878 | Not Available | Positive | 2218631 - 2218759 | 4763.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

