Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN06297358_1859 | Not Available | Negative | 2189936 - 2191420 | 56563.1 |
| predicted transcriptional regulator | SAMN06297358_1860 | Not Available | Negative | 2191423 - 2191788 | 14001.9 |
| poly(beta-d-mannuronate) lyase | SAMN06297358_1861 | Not Available | Negative | 2192473 - 2193837 | 50254.3 |
| hypothetical protein | SAMN06297358_1862 | Not Available | Negative | 2193849 - 2195060 | 43443.8 |
| poly(beta-d-mannuronate) lyase | SAMN06297358_1863 | Not Available | Negative | 2195083 - 2197404 | 84998.1 |
| hypothetical protein | SAMN06297358_1864 | Not Available | Negative | 2197647 - 2199245 | 57765.9 |
| ragb/susd domain-containing protein | SAMN06297358_1865 | Not Available | Negative | 2199259 - 2200869 | 59065.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1866 | Not Available | Negative | 2200882 - 2204088 | 117814.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN06297358_1867 | Not Available | Negative | 2204482 - 2205234 | 26310.4 |
| mfs transporter, acs family, hexuronate transporter | SAMN06297358_1868 | Not Available | Negative | 2205338 - 2206624 | 47163.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

