Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN06297358_1826 | Not Available | Positive | 2157004 - 2157363 | 13511.5 |
| heat shock protein hsp15 | SAMN06297358_1827 | Not Available | Negative | 2157427 - 2157828 | 15135.1 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN06297358_1828 | Not Available | Positive | 2157975 - 2158793 | 29575.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_1829 | Not Available | Positive | 2158803 - 2160017 | 45827.7 |
| hypothetical protein | SAMN06297358_1830 | Not Available | Positive | 2160080 - 2160961 | 34845.3 |
| glycosyltransferase, gt2 family | SAMN06297358_1831 | Not Available | Positive | 2160965 - 2161951 | 37829.3 |
| protein of unknown function | SAMN06297358_1832 | Not Available | Negative | 2161956 - 2162588 | 23864.8 |
| l-threonylcarbamoyladenylate synthase | SAMN06297358_1833 | Not Available | Positive | 2162676 - 2163245 | 21083.1 |
| hdig domain-containing protein | SAMN06297358_1834 | Not Available | Positive | 2163370 - 2164806 | 54210.6 |
| pria4b orf-3-like protein | SAMN06297358_1835 | Not Available | Positive | 2164934 - 2165587 | 25022.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

