Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitin ac lyase | SAMN06297358_0168 | Not Available | Positive | 186417 - 188513 | 78881.7 |
| hypothetical protein | SAMN06297358_0169 | Not Available | Positive | 188720 - 188962 | 8767.44 |
| hypothetical protein | SAMN06297358_0170 | Not Available | Positive | 188970 - 189377 | 15979.3 |
| hypothetical protein | SAMN06297358_0171 | Not Available | Positive | 189579 - 190097 | 20457.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0172 | Not Available | Positive | 190462 - 191877 | 51208.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0173 | Not Available | Positive | 192102 - 193589 | 53049.8 |
| right handed beta helix region | SAMN06297358_0174 | Not Available | Negative | 193668 - 194870 | 43410.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0175 | Not Available | Positive | 195217 - 198351 | 116679.0 |
| starch-binding associating with outer membrane | SAMN06297358_0176 | Not Available | Positive | 198362 - 199990 | 60859.2 |
| protein of unknown function | SAMN06297358_0177 | Not Available | Positive | 199984 - 200931 | 34177.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

