Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recn | SAMN06297358_1802 | Not Available | Positive | 2131072 - 2132724 | 60873.8 |
| carboxypepd_reg-like domain-containing protein | SAMN06297358_1803 | Not Available | Positive | 2132807 - 2134036 | 46642.4 |
| dna repair photolyase | SAMN06297358_1805 | Not Available | Positive | 2134228 - 2135298 | 40445.8 |
| rare lipoprotein a | SAMN06297358_1806 | Not Available | Negative | 2135311 - 2135664 | 12756.8 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN06297358_1807 | Not Available | Negative | 2135861 - 2138395 | 93999.8 |
| hypothetical protein | SAMN06297358_1809 | Not Available | Positive | 2139129 - 2139548 | 16207.5 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN06297358_1810 | Not Available | Negative | 2139551 - 2140177 | 23798.7 |
| cd2+/zn2+-exporting atpase | SAMN06297358_1811 | Not Available | Negative | 2140273 - 2142234 | 70465.7 |
| hypothetical protein | SAMN06297358_1812 | Not Available | Negative | 2142328 - 2142498 | 6762.45 |
| putative endopeptidase | SAMN06297358_1813 | Not Available | Positive | 2142520 - 2144556 | 75971.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

