Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase family, c-terminal alpha/beta domain | SAMN06297358_1782 | Not Available | Positive | 2107315 - 2108703 | 52591.4 |
| inner membrane transporter rhta | SAMN06297358_1783 | Not Available | Positive | 2108840 - 2109697 | 29686.4 |
| 4fe-4s dicluster domain-containing protein | SAMN06297358_1784 | Not Available | Negative | 2109827 - 2110177 | 12618.4 |
| acyl-coa reductase (luxc) | SAMN06297358_1785 | Not Available | Positive | 2110257 - 2111279 | 39006.3 |
| hypothetical protein | SAMN06297358_1786 | Not Available | Positive | 2111435 - 2111638 | 7852.72 |
| cell division transport system atp-binding protein | SAMN06297358_1787 | Not Available | Positive | 2111640 - 2112329 | 25614.2 |
| molecular chaperone grpe | SAMN06297358_1788 | Not Available | Positive | 2112663 - 2113253 | 22013.1 |
| molecular chaperone dnaj | SAMN06297358_1789 | Not Available | Positive | 2113340 - 2114506 | 41111.7 |
| hypothetical protein | SAMN06297358_1790 | Not Available | Positive | 2114581 - 2115144 | 21179.4 |
| hypothetical protein | SAMN06297358_1791 | Not Available | Positive | 2115274 - 2115672 | 15233.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

