Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted rna-binding protein, contains pua-like domain | SAMN06297358_1762 | Not Available | Negative | 2081315 - 2081728 | 15822.9 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06297358_1763 | Not Available | Negative | 2081925 - 2082779 | 31033.9 |
| oxidoreductase family, nad-binding rossmann fold | SAMN06297358_1764 | Not Available | Negative | 2082835 - 2083809 | 35844.4 |
| amidohydrolase | SAMN06297358_1765 | Not Available | Negative | 2083796 - 2085004 | 44414.5 |
| solute:na+ symporter, sss family | SAMN06297358_1766 | Not Available | Negative | 2085010 - 2086578 | 57658.9 |
| hypothetical protein | SAMN06297358_1767 | Not Available | Negative | 2086612 - 2087982 | 51058.1 |
| glucose 1-dehydrogenase | SAMN06297358_1768 | Not Available | Negative | 2087995 - 2088762 | 28068.0 |
| galactonate dehydratase | SAMN06297358_1769 | Not Available | Negative | 2088772 - 2089950 | 43938.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN06297358_1770 | Not Available | Negative | 2089959 - 2091281 | 48421.7 |
| gluconolactonase | SAMN06297358_1771 | Not Available | Positive | 2091422 - 2092216 | 29399.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

