Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN06297358_1751 | Not Available | Positive | 2071536 - 2072837 | 49996.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06297358_1752 | Not Available | Positive | 2072830 - 2073510 | 26237.9 |
| hypothetical protein | SAMN06297358_1753 | Not Available | Negative | 2073387 - 2073776 | 14828.9 |
| atp-binding cassette, subfamily f, member 3 | SAMN06297358_1755 | Not Available | Positive | 2073844 - 2075751 | 71852.8 |
| predicted dehydrogenase | SAMN06297358_1756 | Not Available | Positive | 2076045 - 2077025 | 36015.0 |
| protein of unknown function | SAMN06297358_1757 | Not Available | Positive | 2077167 - 2078423 | 48957.5 |
| dinb superfamily protein | SAMN06297358_1758 | Not Available | Positive | 2078430 - 2078954 | 20061.9 |
| acyl-coa hydrolase | SAMN06297358_1759 | Not Available | Positive | 2079056 - 2079589 | 19529.3 |
| sodium/proton antiporter, cpa1 family | SAMN06297358_1760 | Not Available | Positive | 2079596 - 2080786 | 44465.2 |
| hypothetical protein | SAMN06297358_1761 | Not Available | Negative | 2080783 - 2081301 | 18866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

