Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06297358_1740 | Not Available | Negative | 2057873 - 2059135 | 47476.4 |
| atpase family associated with various cellular activities (aaa) | SAMN06297358_1741 | Not Available | Negative | 2059137 - 2060441 | 48513.4 |
| hypothetical protein | SAMN06297358_1742 | Not Available | Positive | 2060817 - 2061320 | 20146.0 |
| hypothetical protein | SAMN06297358_1743 | Not Available | Positive | 2061455 - 2062000 | 20899.4 |
| hypothetical protein | SAMN06297358_1744 | Not Available | Positive | 2062087 - 2063175 | 43389.2 |
| hypothetical protein | SAMN06297358_1745 | Not Available | Positive | 2063273 - 2063764 | 19376.9 |
| nad(p)h dehydrogenase (quinone) | SAMN06297358_1746 | Not Available | Negative | 2063854 - 2064699 | 29733.3 |
| transcriptional regulator, badm/rrf2 family | SAMN06297358_1747 | Not Available | Negative | 2064910 - 2065323 | 15020.0 |
| asma protein | SAMN06297358_1748 | Not Available | Positive | 2065606 - 2068698 | 114432.0 |
| outer membrane protein beta-barrel family protein | SAMN06297358_1750 | Not Available | Negative | 2069258 - 2071420 | 84033.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

