Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mrna 3-end processing factor | SAMN06297358_1719 | Not Available | Positive | 2041193 - 2042143 | 36248.7 |
| hypothetical protein | SAMN06297358_1720 | Not Available | Positive | 2042202 - 2042348 | 5677.92 |
| tspo and mbr related proteins | SAMN06297358_1721 | Not Available | Positive | 2042429 - 2042917 | 19141.1 |
| nte family protein | SAMN06297358_1722 | Not Available | Positive | 2042968 - 2045283 | 87345.2 |
| hypothetical protein | SAMN06297358_1723 | Not Available | Positive | 2045284 - 2045811 | 19710.2 |
| outer membrane protein assembly factor bama | SAMN06297358_1724 | Not Available | Negative | 2045939 - 2048338 | 91194.3 |
| Trna-cys | Not Available | Not Available | Positive | 2049226 - 2049299 | Not Available |
| hypothetical protein | SAMN06297358_1727 | Not Available | Positive | 2049335 - 2049505 | 6284.7 |
| hypothetical protein | SAMN06297358_1728 | Not Available | Negative | 2049584 - 2049904 | 12394.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN06297358_1729 | Not Available | Positive | 2050076 - 2050513 | 16934.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

