Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin | SAMN06297358_0158 | Not Available | Negative | 170009 - 170752 | 28238.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_0159 | Not Available | Positive | 171035 - 171637 | 23886.8 |
| fecr family protein | SAMN06297358_0160 | Not Available | Positive | 171714 - 172733 | 38597.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0161 | Not Available | Positive | 172779 - 176381 | 131940.0 |
| susd family protein | SAMN06297358_0162 | Not Available | Positive | 176393 - 177790 | 52135.7 |
| peroxiredoxin | SAMN06297358_0163 | Not Available | Positive | 177809 - 179731 | 73198.3 |
| hypothetical protein | SAMN06297358_0164 | Not Available | Positive | 179731 - 180807 | 39669.1 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06297358_0165 | Not Available | Positive | 180949 - 181401 | 16268.7 |
| nad(p)h-dependent fmn reductase | SAMN06297358_0166 | Not Available | Positive | 181526 - 182059 | 19348.4 |
| two component regulator propeller | SAMN06297358_0167 | Not Available | Positive | 182213 - 186301 | 153939.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

