Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1709 | Not Available | Positive | 2033457 - 2033927 | 17276.5 |
| protein of unknown function | SAMN06297358_1710 | Not Available | Negative | 2034039 - 2034362 | 12853.9 |
| atp-binding cassette, subfamily b | SAMN06297358_1711 | Not Available | Negative | 2034466 - 2036247 | 67350.5 |
| leucine dehydrogenase | SAMN06297358_1712 | Not Available | Positive | 2036452 - 2037540 | 39256.2 |
| nusb antitermination factor | SAMN06297358_1713 | Not Available | Positive | 2037590 - 2038543 | 37059.8 |
| protein of unknown function | SAMN06297358_1714 | Not Available | Positive | 2038580 - 2039023 | 15800.9 |
| preprotein translocase subunit yajc | SAMN06297358_1715 | Not Available | Positive | 2039165 - 2039473 | 10911.7 |
| hypothetical protein | SAMN06297358_1716 | Not Available | Positive | 2039542 - 2040489 | 36005.1 |
| dephospho-coa kinase | SAMN06297358_1717 | Not Available | Positive | 2040489 - 2041085 | 22318.0 |
| hypothetical protein | SAMN06297358_1718 | Not Available | Positive | 2041138 - 2041251 | 4548.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

