Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1678 | Not Available | Positive | 2001140 - 2001790 | 24855.5 |
| yarhg domain-containing protein | SAMN06297358_1679 | Not Available | Positive | 2001860 - 2002930 | 41828.8 |
| hypothetical protein | SAMN06297358_1680 | Not Available | Negative | 2002957 - 2003742 | 28110.3 |
| magnesium transporter | SAMN06297358_1681 | Not Available | Positive | 2003895 - 2005268 | 51151.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1682 | Not Available | Negative | 2005556 - 2007547 | 72241.7 |
| hypothetical protein | SAMN06297358_1683 | Not Available | Negative | 2007640 - 2009391 | 66903.1 |
| hypothetical protein | SAMN06297358_1684 | Not Available | Positive | 2009497 - 2010324 | 30823.6 |
| o-succinylhomoserine sulfhydrylase | SAMN06297358_1685 | Not Available | Negative | 2010595 - 2011761 | 42702.1 |
| putative redox protein | SAMN06297358_1686 | Not Available | Negative | 2011858 - 2012271 | 15373.7 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN06297358_1687 | Not Available | Negative | 2012340 - 2013143 | 29822.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

