Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | SAMN06297358_1658 | Not Available | Positive | 1983238 - 1984125 | 33653.4 |
| polysaccharide deacetylase | SAMN06297358_1659 | Not Available | Positive | 1984138 - 1984995 | 32737.2 |
| hypothetical protein | SAMN06297358_1660 | Not Available | Positive | 1984999 - 1986414 | 53616.4 |
| hypothetical protein | SAMN06297358_1661 | Not Available | Negative | 1986411 - 1986854 | 15898.8 |
| nitroreductase | SAMN06297358_1662 | Not Available | Negative | 1986995 - 1987573 | 21805.1 |
| hypothetical protein | SAMN06297358_1663 | Not Available | Negative | 1987679 - 1988233 | 21317.9 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN06297358_1664 | Not Available | Positive | 1988390 - 1989232 | 31517.5 |
| four helix bundle protein | SAMN06297358_1665 | Not Available | Positive | 1989308 - 1989664 | 13496.6 |
| alkylated dna repair dioxygenase alkb | SAMN06297358_1666 | Not Available | Positive | 1989682 - 1990290 | 23146.6 |
| atp-dependent rna helicase rhle | SAMN06297358_1667 | Not Available | Negative | 1990330 - 1991640 | 49399.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

