Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06297358_1648 | Not Available | Negative | 1968731 - 1970173 | 52541.6 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN06297358_1649 | Not Available | Positive | 1970498 - 1972762 | 78719.7 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06297358_1650 | Not Available | Positive | 1972884 - 1974311 | 50769.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_1651 | Not Available | Positive | 1974908 - 1975558 | 23931.3 |
| hypothetical protein | SAMN06297358_1652 | Not Available | Positive | 1975789 - 1976316 | 19268.2 |
| hypothetical protein | SAMN06297358_1653 | Not Available | Positive | 1976867 - 1977196 | 13143.2 |
| hypothetical protein | SAMN06297358_1654 | Not Available | Positive | 1977228 - 1977419 | 7527.95 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_1655 | Not Available | Positive | 1977609 - 1979066 | 54687.7 |
| hypothetical protein | SAMN06297358_1656 | Not Available | Positive | 1979424 - 1979912 | 19058.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06297358_1657 | Not Available | Negative | 1980398 - 1982902 | 95277.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

