Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1638 | Not Available | Negative | 1959291 - 1959647 | 13206.9 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN06297358_1639 | Not Available | Negative | 1959707 - 1960210 | 19145.3 |
| response regulator receiver domain-containing protein | SAMN06297358_1640 | Not Available | Positive | 1960468 - 1960854 | 14441.7 |
| protein of unknown function | SAMN06297358_1641 | Not Available | Negative | 1960855 - 1961082 | 8706.65 |
| atp-independent rna helicase dbpa | SAMN06297358_1642 | Not Available | Negative | 1961235 - 1962542 | 48600.4 |
| hypothetical protein | SAMN06297358_1643 | Not Available | Positive | 1962797 - 1963270 | 17682.4 |
| protein of unknown function | SAMN06297358_1644 | Not Available | Negative | 1963374 - 1963955 | 22309.9 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN06297358_1645 | Not Available | Negative | 1964029 - 1965072 | 37255.7 |
| ammonium transporter | SAMN06297358_1646 | Not Available | Negative | 1965343 - 1966701 | 47991.5 |
| hypothetical protein | SAMN06297358_1647 | Not Available | Negative | 1967096 - 1968043 | 36287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

