Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl peptidase iv (dpp iv) n-terminal region | SAMN06297358_1598 | Not Available | Negative | 1917693 - 1918994 | 47931.5 |
| hypothetical protein | SAMN06297358_1599 | Not Available | Negative | 1919101 - 1919460 | 13333.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1600 | Not Available | Positive | 1919734 - 1920327 | 23409.0 |
| fecr family protein | SAMN06297358_1601 | Not Available | Positive | 1920423 - 1921550 | 41693.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1602 | Not Available | Positive | 1921601 - 1925224 | 134939.0 |
| susd family protein | SAMN06297358_1603 | Not Available | Positive | 1925229 - 1926656 | 53997.7 |
| protein of unknown function | SAMN06297358_1604 | Not Available | Positive | 1926663 - 1929104 | 92419.5 |
| protein of unknown function | SAMN06297358_1605 | Not Available | Positive | 1929101 - 1929622 | 19109.4 |
| protein of unknown function | SAMN06297358_1606 | Not Available | Negative | 1929871 - 1930254 | 14311.7 |
| hypothetical protein | SAMN06297358_1607 | Not Available | Negative | 1930232 - 1931035 | 30227.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

