Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN06297358_1578 | Not Available | Negative | 1891418 - 1894942 | 126443.0 |
| response regulator receiver domain-containing protein | SAMN06297358_1579 | Not Available | Negative | 1895083 - 1895538 | 17570.2 |
| thif family protein | SAMN06297358_1580 | Not Available | Positive | 1895660 - 1897984 | 87539.3 |
| hypothetical protein | SAMN06297358_1581 | Not Available | Positive | 1897971 - 1898696 | 26592.9 |
| hypothetical protein | SAMN06297358_1582 | Not Available | Positive | 1898686 - 1900818 | 81321.5 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06297358_1583 | Not Available | Positive | 1900829 - 1901908 | 41016.9 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN06297358_1584 | Not Available | Positive | 1901898 - 1902317 | 15885.5 |
| hypothetical protein | SAMN06297358_1585 | Not Available | Negative | 1902379 - 1902768 | 14638.7 |
| predicted membrane protein | SAMN06297358_1586 | Not Available | Positive | 1903027 - 1905384 | 89124.9 |
| hypothetical protein | SAMN06297358_1587 | Not Available | Positive | 1905368 - 1906594 | 47113.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

