Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN06297358_1568 | Not Available | Negative | 1878455 - 1879231 | 29594.7 |
| lysophospholipase l1 | SAMN06297358_1569 | Not Available | Negative | 1879233 - 1879970 | 27516.5 |
| protein of unknown function | SAMN06297358_1570 | Not Available | Negative | 1880029 - 1881591 | 56232.3 |
| starch-binding associating with outer membrane | SAMN06297358_1571 | Not Available | Negative | 1881701 - 1883512 | 67575.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1572 | Not Available | Negative | 1883524 - 1886721 | 116231.0 |
| transcriptional regulator, laci family | SAMN06297358_1573 | Not Available | Positive | 1886904 - 1887965 | 39300.3 |
| protein of unknown function | SAMN06297358_1574 | Not Available | Negative | 1887966 - 1888352 | 14046.8 |
| large conductance mechanosensitive channel | SAMN06297358_1575 | Not Available | Negative | 1888462 - 1888848 | 13744.3 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN06297358_1576 | Not Available | Positive | 1888957 - 1890456 | 57803.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_1577 | Not Available | Negative | 1890453 - 1891421 | 35291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

