Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1548 | Not Available | Negative | 1850901 - 1851752 | 32149.0 |
| hypothetical protein | SAMN06297358_1549 | Not Available | Negative | 1851743 - 1852120 | 14772.2 |
| ymgg-like gly-zipper | SAMN06297358_1550 | Not Available | Negative | 1852314 - 1852793 | 16381.6 |
| metallo-beta-lactamase family protein | SAMN06297358_1551 | Not Available | Positive | 1853137 - 1854525 | 51950.4 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_1552 | Not Available | Negative | 1854578 - 1855561 | 36718.7 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN06297358_1553 | Not Available | Negative | 1855563 - 1856456 | 32769.8 |
| hypothetical protein | SAMN06297358_1554 | Not Available | Negative | 1856514 - 1857275 | 26207.9 |
| hypothetical protein | SAMN06297358_1555 | Not Available | Negative | 1857316 - 1859967 | 94714.4 |
| protein of unknown function | SAMN06297358_1556 | Not Available | Negative | 1860397 - 1861065 | 24872.6 |
| hypothetical protein | SAMN06297358_1557 | Not Available | Negative | 1861067 - 1862167 | 40129.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

