Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1538 | Not Available | Negative | 1841297 - 1842286 | 37816.3 |
| hypothetical protein | SAMN06297358_1539 | Not Available | Positive | 1842436 - 1842789 | 12855.5 |
| pyridoxine 5'-phosphate synthase | SAMN06297358_1540 | Not Available | Positive | 1842925 - 1843641 | 26543.7 |
| threonine/homoserine efflux transporter rhta | SAMN06297358_1541 | Not Available | Positive | 1843721 - 1844638 | 33154.0 |
| hypothetical protein | SAMN06297358_1542 | Not Available | Positive | 1844760 - 1845317 | 21155.3 |
| hypothetical protein | SAMN06297358_1543 | Not Available | Positive | 1845616 - 1846626 | 38360.8 |
| citrate synthase | SAMN06297358_1544 | Not Available | Negative | 1846813 - 1848081 | 47801.4 |
| protein of unknown function | SAMN06297358_1545 | Not Available | Negative | 1848202 - 1848744 | 19301.1 |
| hypothetical protein | SAMN06297358_1546 | Not Available | Negative | 1848911 - 1849492 | 20312.0 |
| trna dimethylallyltransferase | SAMN06297358_1547 | Not Available | Negative | 1849979 - 1850911 | 35597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

