Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1528 | Not Available | Positive | 1828805 - 1829053 | 9373.03 |
| protein of unknown function | SAMN06297358_1529 | Not Available | Positive | 1829078 - 1829878 | 30487.0 |
| luciferase family oxidoreductase, group 1 | SAMN06297358_1530 | Not Available | Negative | 1830161 - 1831189 | 37958.2 |
| transcriptional regulator, arsr family | SAMN06297358_1531 | Not Available | Negative | 1831199 - 1831501 | 11225.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06297358_1532 | Not Available | Positive | 1831897 - 1832574 | 25610.0 |
| signal transduction histidine kinase | SAMN06297358_1533 | Not Available | Positive | 1832846 - 1834207 | 51510.0 |
| hypothetical protein | SAMN06297358_1534 | Not Available | Positive | 1834505 - 1834819 | 11418.6 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN06297358_1535 | Not Available | Positive | 1835302 - 1836561 | 48006.7 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN06297358_1536 | Not Available | Positive | 1836565 - 1837659 | 40010.0 |
| cobalt-zinc-cadmium resistance protein czca | SAMN06297358_1537 | Not Available | Positive | 1837771 - 1840899 | 115933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

