Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | SAMN06297358_0138 | Not Available | Negative | 150332 - 152050 | 63721.3 |
| orotidine-5'-phosphate decarboxylase | SAMN06297358_0139 | Not Available | Positive | 152800 - 153630 | 30905.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06297358_0140 | Not Available | Positive | 153627 - 154526 | 32736.8 |
| protein of unknown function | SAMN06297358_0141 | Not Available | Positive | 154650 - 155933 | 49536.6 |
| phage shock protein c (pspc) family protein | SAMN06297358_0142 | Not Available | Positive | 156090 - 156308 | 8570.69 |
| ankyrin repeat | SAMN06297358_0143 | Not Available | Negative | 156423 - 157079 | 23910.9 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN06297358_0144 | Not Available | Positive | 157455 - 160055 | 97096.2 |
| outer membrane lipoprotein-sorting protein | SAMN06297358_0145 | Not Available | Positive | 160077 - 160727 | 24254.2 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN06297358_0146 | Not Available | Positive | 160828 - 161592 | 28892.6 |
| Trna-leu | Not Available | Not Available | Positive | 161672 - 161755 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

