Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1488 | Not Available | Positive | 1785598 - 1786617 | 38500.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_1489 | Not Available | Negative | 1786612 - 1787331 | 27138.9 |
| 3-dehydroquinate dehydratase | SAMN06297358_1490 | Not Available | Negative | 1787408 - 1787824 | 15250.3 |
| integrase/recombinase xerd | SAMN06297358_1491 | Not Available | Positive | 1787964 - 1788863 | 33753.9 |
| chemotaxis protein motb | SAMN06297358_1492 | Not Available | Negative | 1788914 - 1789777 | 31500.5 |
| release factor glutamine methyltransferase | SAMN06297358_1493 | Not Available | Negative | 1789876 - 1790769 | 33420.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN06297358_1494 | Not Available | Positive | 1791020 - 1792063 | 39103.9 |
| eama-like transporter family protein | SAMN06297358_1495 | Not Available | Positive | 1792105 - 1792971 | 32909.7 |
| uncharacterized protein, yigz family | SAMN06297358_1496 | Not Available | Positive | 1792961 - 1793575 | 22965.8 |
| uridine phosphorylase | SAMN06297358_1497 | Not Available | Positive | 1793700 - 1794572 | 31894.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

