Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN06297358_1478 | Not Available | Positive | 1774636 - 1775358 | 27547.5 |
| polyribonucleotide nucleotidyltransferase | SAMN06297358_1479 | Not Available | Negative | 1775526 - 1777664 | 77618.4 |
| small subunit ribosomal protein s15 | SAMN06297358_1480 | Not Available | Negative | 1777779 - 1778063 | 10726.2 |
| hypothetical protein | SAMN06297358_1481 | Not Available | Negative | 1778458 - 1778682 | 8580.73 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06297358_1482 | Not Available | Positive | 1778835 - 1780232 | 51986.3 |
| coproporphyrinogen oxidase | SAMN06297358_1483 | Not Available | Negative | 1780286 - 1781191 | 34954.2 |
| predicted arabinose efflux permease, mfs family | SAMN06297358_1484 | Not Available | Negative | 1781572 - 1782798 | 44232.2 |
| magnesium transporter | SAMN06297358_1485 | Not Available | Negative | 1782873 - 1783991 | 43567.0 |
| wbqc-like protein family protein | SAMN06297358_1486 | Not Available | Negative | 1784057 - 1784659 | 23990.4 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN06297358_1487 | Not Available | Positive | 1784697 - 1785566 | 34091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

