Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1458 | Not Available | Positive | 1753026 - 1753571 | 21013.5 |
| hypothetical protein | SAMN06297358_1459 | Not Available | Positive | 1753573 - 1753719 | 5608.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN06297358_1460 | Not Available | Negative | 1753846 - 1754796 | 33402.3 |
| phosphoserine aminotransferase apoenzyme | SAMN06297358_1461 | Not Available | Negative | 1754800 - 1755867 | 39137.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_1462 | Not Available | Negative | 1756019 - 1758457 | 92104.0 |
| ribulose-phosphate 3-epimerase | SAMN06297358_1463 | Not Available | Negative | 1758463 - 1759161 | 25172.5 |
| two component regulator propeller | SAMN06297358_1464 | Not Available | Negative | 1759310 - 1762426 | 118563.0 |
| tetratricopeptide repeat-containing protein | SAMN06297358_1465 | Not Available | Negative | 1762451 - 1764505 | 77518.2 |
| hypothetical protein | SAMN06297358_1466 | Not Available | Positive | 1764867 - 1765883 | 37414.1 |
| hypothetical protein | SAMN06297358_1467 | Not Available | Positive | 1765927 - 1766550 | 23177.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

