Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMN06297358_1448 | Not Available | Positive | 1744975 - 1745853 | 32900.7 |
| n-acetylmuramoyl-l-alanine amidase | SAMN06297358_1449 | Not Available | Positive | 1745885 - 1746661 | 29182.1 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN06297358_1450 | Not Available | Positive | 1746746 - 1747699 | 34206.4 |
| cold-shock dna-binding protein family | SAMN06297358_1451 | Not Available | Negative | 1747883 - 1748077 | 6991.17 |
| ribonuclease z | SAMN06297358_1452 | Not Available | Negative | 1748272 - 1749183 | 34646.4 |
| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) | SAMN06297358_1453 | Not Available | Negative | 1749193 - 1749579 | 14312.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN06297358_1454 | Not Available | Negative | 1749652 - 1750599 | 35574.6 |
| hypothetical protein | SAMN06297358_1455 | Not Available | Negative | 1750773 - 1751048 | 10324.6 |
| phosphate starvation-inducible protein phoh | SAMN06297358_1456 | Not Available | Negative | 1751048 - 1752010 | 35262.0 |
| hypothetical protein | SAMN06297358_1457 | Not Available | Positive | 1752115 - 1752894 | 29433.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

