Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_1428 | Not Available | Positive | 1721803 - 1724076 | 86412.2 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN06297358_1429 | Not Available | Negative | 1724186 - 1725664 | 56504.7 |
| hypothetical protein | SAMN06297358_1430 | Not Available | Positive | 1725775 - 1726020 | 9431.97 |
| two component transcriptional regulator, luxr family | SAMN06297358_1431 | Not Available | Negative | 1726017 - 1726700 | 25163.5 |
| pas domain s-box-containing protein | SAMN06297358_1432 | Not Available | Negative | 1726687 - 1727808 | 43027.2 |
| response regulator receiver domain-containing protein | SAMN06297358_1433 | Not Available | Negative | 1727903 - 1728283 | 14178.0 |
| ferritin-like metal-binding protein ycie | SAMN06297358_1434 | Not Available | Negative | 1728289 - 1728819 | 19977.9 |
| amidohydrolase, pncc family | SAMN06297358_1435 | Not Available | Positive | 1728960 - 1729499 | 19894.4 |
| hypothetical protein | SAMN06297358_1436 | Not Available | Negative | 1729489 - 1730373 | 31937.1 |
| hypothetical protein | SAMN06297358_1437 | Not Available | Positive | 1730405 - 1730515 | 4186.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

