Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | SAMN06297358_0128 | Not Available | Positive | 140437 - 141675 | 46139.8 |
| amp nucleosidase | SAMN06297358_0129 | Not Available | Positive | 141723 - 142688 | 35939.7 |
| phosphohistidine phosphatase | SAMN06297358_0130 | Not Available | Negative | 142774 - 143274 | 18599.2 |
| adp-heptose:lps heptosyltransferase | SAMN06297358_0131 | Not Available | Negative | 143267 - 144292 | 38867.9 |
| protein of unknown function | SAMN06297358_0132 | Not Available | Negative | 144303 - 144905 | 23455.9 |
| dna polymerase (family 10) | SAMN06297358_0133 | Not Available | Negative | 144939 - 146615 | 62878.9 |
| protease-4 | SAMN06297358_0134 | Not Available | Negative | 146693 - 148459 | 64580.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN06297358_0135 | Not Available | Positive | 148569 - 149081 | 19600.6 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN06297358_0136 | Not Available | Positive | 149074 - 149451 | 14306.1 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN06297358_0137 | Not Available | Negative | 149576 - 150247 | 25085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

