Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen operon protein | SAMN06297358_1398 | Not Available | Positive | 1691118 - 1693181 | 78423.6 |
| maltooligosyl trehalose hydrolase | SAMN06297358_1399 | Not Available | Positive | 1693194 - 1695032 | 69174.6 |
| 4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,tigr02401 | SAMN06297358_1400 | Not Available | Positive | 1695025 - 1699032 | 153672.0 |
| hypothetical protein | SAMN06297358_1401 | Not Available | Positive | 1699543 - 1699740 | 7640.5 |
| Trna-leu | Not Available | Not Available | Positive | 1701273 - 1701355 | Not Available |
| integral membrane protein | SAMN06297358_1403 | Not Available | Negative | 1701472 - 1701768 | 11221.3 |
| molecular chaperone hscb | SAMN06297358_1404 | Not Available | Negative | 1701844 - 1702365 | 20414.3 |
| regulator of sigma e protease | SAMN06297358_1405 | Not Available | Negative | 1702406 - 1703806 | 51326.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN06297358_1406 | Not Available | Negative | 1703827 - 1704999 | 42737.0 |
| rep element-mobilizing transposase rayt | SAMN06297358_1407 | Not Available | Negative | 1705306 - 1705767 | 18021.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

