Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional non-homologous end joining protein ligd | SAMN06297358_1388 | Not Available | Negative | 1682456 - 1685197 | 103265.0 |
| protein of unknown function | SAMN06297358_1389 | Not Available | Negative | 1685206 - 1685376 | 6344.59 |
| hypothetical protein | SAMN06297358_1390 | Not Available | Positive | 1685628 - 1686095 | 16502.7 |
| predicted phosphoesterase | SAMN06297358_1391 | Not Available | Negative | 1686153 - 1686902 | 26932.5 |
| uncharacterised nucleotidyltransferase | SAMN06297358_1392 | Not Available | Negative | 1686903 - 1687745 | 32886.8 |
| inorganic pyrophosphatase | SAMN06297358_1393 | Not Available | Positive | 1687817 - 1688629 | 30571.1 |
| hypothetical protein | SAMN06297358_1394 | Not Available | Positive | 1688637 - 1688885 | 9489.57 |
| nicotinamide-nucleotide amidase | SAMN06297358_1395 | Not Available | Positive | 1689320 - 1689814 | 17958.7 |
| thioredoxin reductase | SAMN06297358_1396 | Not Available | Positive | 1689818 - 1690744 | 33371.8 |
| protein of unknown function | SAMN06297358_1397 | Not Available | Positive | 1690760 - 1691065 | 11531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

