Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1377 | Not Available | Negative | 1677524 - 1677706 | 7020.57 |
| spw repeat-containing protein | SAMN06297358_1378 | Not Available | Negative | 1677769 - 1678143 | 13744.2 |
| hypothetical protein | SAMN06297358_1379 | Not Available | Negative | 1678177 - 1678659 | 18558.4 |
| threonine dehydrogenase | SAMN06297358_1380 | Not Available | Negative | 1678664 - 1679806 | 41192.9 |
| hypothetical protein | SAMN06297358_1381 | Not Available | Positive | 1680054 - 1680302 | 9019.85 |
| manganese containing catalase | SAMN06297358_1382 | Not Available | Positive | 1680432 - 1680677 | 8979.81 |
| hypothetical protein | SAMN06297358_1384 | Not Available | Negative | 1681312 - 1681560 | 9839.68 |
| hypothetical protein | SAMN06297358_1385 | Not Available | Negative | 1681579 - 1681815 | 8931.1 |
| protein of unknown function | SAMN06297358_1386 | Not Available | Negative | 1681847 - 1682029 | 6716.06 |
| protein of unknown function | SAMN06297358_1387 | Not Available | Negative | 1682175 - 1682438 | 10094.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

