Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN06297358_1367 | Not Available | Positive | 1666430 - 1667053 | 23210.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06297358_1368 | Not Available | Negative | 1667141 - 1668103 | 33683.2 |
| hypothetical protein | SAMN06297358_1369 | Not Available | Negative | 1668203 - 1668556 | 12953.6 |
| hypothetical protein | SAMN06297358_1370 | Not Available | Negative | 1668686 - 1668952 | 9772.23 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06297358_1371 | Not Available | Positive | 1669107 - 1669913 | 29393.7 |
| hypothetical protein | SAMN06297358_1372 | Not Available | Positive | 1669910 - 1672111 | 82989.5 |
| ferritin-like metal-binding protein ycie | SAMN06297358_1373 | Not Available | Positive | 1672250 - 1672759 | 18688.2 |
| glycine/d-amino acid oxidase | SAMN06297358_1374 | Not Available | Positive | 1672828 - 1674354 | 56590.6 |
| hypothetical protein | SAMN06297358_1375 | Not Available | Positive | 1674368 - 1675036 | 25415.3 |
| small-conductance mechanosensitive channel | SAMN06297358_1376 | Not Available | Negative | 1675065 - 1677386 | 87201.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

