Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1357 | Not Available | Positive | 1657783 - 1658349 | 22373.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN06297358_1358 | Not Available | Positive | 1658403 - 1658948 | 20737.4 |
| dna repair protein radc | SAMN06297358_1359 | Not Available | Negative | 1658991 - 1659458 | 17202.8 |
| hypothetical protein | SAMN06297358_1360 | Not Available | Negative | 1659703 - 1659861 | 6165.17 |
| hypothetical protein | SAMN06297358_1361 | Not Available | Positive | 1660063 - 1660320 | 10003.0 |
| hypothetical protein | SAMN06297358_1362 | Not Available | Positive | 1660995 - 1661432 | 16178.7 |
| type iv secretory system conjugative dna transfer | SAMN06297358_1363 | Not Available | Negative | 1661471 - 1663543 | 77914.4 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN06297358_1364 | Not Available | Negative | 1663551 - 1664807 | 47373.7 |
| mobilisation protein (mobc) | SAMN06297358_1365 | Not Available | Negative | 1664792 - 1665199 | 15625.2 |
| hypothetical protein | SAMN06297358_1366 | Not Available | Positive | 1665732 - 1666079 | 13991.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

