Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidopyrimidine-dna glycosylase | SAMN06297358_1347 | Not Available | Positive | 1651161 - 1651937 | 29141.6 |
| protein of unknown function | SAMN06297358_1348 | Not Available | Positive | 1652003 - 1652188 | 6777.07 |
| hypothetical protein | SAMN06297358_1349 | Not Available | Positive | 1652411 - 1652659 | 8916.24 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN06297358_1350 | Not Available | Positive | 1652698 - 1653039 | 12713.5 |
| uncharacterized conserved protein yece, duf72 family | SAMN06297358_1351 | Not Available | Negative | 1653041 - 1653943 | 34837.3 |
| hypothetical protein | SAMN06297358_1352 | Not Available | Negative | 1653954 - 1654184 | 8620.12 |
| putative sos response-associated peptidase yedk | SAMN06297358_1353 | Not Available | Negative | 1654269 - 1655081 | 31239.5 |
| hypothetical protein | SAMN06297358_1354 | Not Available | Negative | 1655276 - 1655866 | 22353.7 |
| dna polymerase v | SAMN06297358_1355 | Not Available | Negative | 1655885 - 1657153 | 48397.9 |
| dna polymerase v | SAMN06297358_1356 | Not Available | Negative | 1657116 - 1657586 | 17851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

