Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mtn3 and saliva related transmembrane protein | SAMN06297358_1336 | Not Available | Positive | 1644426 - 1644686 | 9630.18 |
| hypothetical protein | SAMN06297358_1337 | Not Available | Negative | 1644749 - 1644916 | 6510.71 |
| ferritin-like metal-binding protein ycie | SAMN06297358_1338 | Not Available | Positive | 1645138 - 1645677 | 19728.4 |
| two component transcriptional regulator, luxr family | SAMN06297358_1339 | Not Available | Negative | 1645867 - 1646505 | 23645.7 |
| protein of unknown function | SAMN06297358_1340 | Not Available | Negative | 1647138 - 1647659 | 19607.2 |
| putative intracellular protease/amidase | SAMN06297358_1341 | Not Available | Positive | 1648060 - 1648758 | 24927.1 |
| dna ligase d, 3'-phosphoesterase domain-containing protein | SAMN06297358_1342 | Not Available | Positive | 1648788 - 1649102 | 11932.1 |
| protein of unknown function | SAMN06297358_1344 | Not Available | Positive | 1649865 - 1650128 | 10185.6 |
| hypothetical protein | SAMN06297358_1345 | Not Available | Positive | 1650381 - 1650614 | 8903.87 |
| hypothetical protein | SAMN06297358_1346 | Not Available | Positive | 1650653 - 1651105 | 16905.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

