Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1314 | Not Available | Positive | 1629710 - 1630405 | 26291.1 |
| hypothetical protein | SAMN06297358_1315 | Not Available | Negative | 1630901 - 1631080 | 6878.37 |
| rsbt co-antagonist protein rsbr | SAMN06297358_1316 | Not Available | Positive | 1631185 - 1632060 | 32199.1 |
| rsbt antagonist protein rsbs | SAMN06297358_1317 | Not Available | Positive | 1632053 - 1632463 | 14845.3 |
| serine/threonine-protein kinase rsbt | SAMN06297358_1318 | Not Available | Positive | 1632444 - 1632857 | 14846.3 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN06297358_1319 | Not Available | Positive | 1632850 - 1633857 | 37043.8 |
| signal transduction histidine kinase | SAMN06297358_1320 | Not Available | Positive | 1633854 - 1635053 | 45076.8 |
| response regulator receiver domain-containing protein | SAMN06297358_1321 | Not Available | Positive | 1635161 - 1635520 | 13510.2 |
| hypothetical protein | SAMN06297358_1322 | Not Available | Negative | 1635789 - 1635998 | 8252.92 |
| protein of unknown function | SAMN06297358_1323 | Not Available | Negative | 1636120 - 1636629 | 19553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

