Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1304 | Not Available | Positive | 1617180 - 1617647 | 17830.5 |
| hypothetical protein | SAMN06297358_1305 | Not Available | Positive | 1617675 - 1617980 | 11284.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_1306 | Not Available | Negative | 1618024 - 1619469 | 55706.3 |
| susd family protein | SAMN06297358_1307 | Not Available | Negative | 1619489 - 1620868 | 52135.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1308 | Not Available | Negative | 1620880 - 1624434 | 132864.0 |
| fecr family protein | SAMN06297358_1309 | Not Available | Negative | 1624616 - 1625749 | 41793.9 |
| sefir domain-containing protein | SAMN06297358_1310 | Not Available | Positive | 1625900 - 1627630 | 66015.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1311 | Not Available | Negative | 1627657 - 1628232 | 22755.5 |
| hypothetical protein | SAMN06297358_1312 | Not Available | Positive | 1628691 - 1629005 | 11766.5 |
| helix-turn-helix | SAMN06297358_1313 | Not Available | Negative | 1629134 - 1629616 | 18283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

