Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_1294 | Not Available | Negative | 1610242 - 1610601 | 13431.9 |
| protein of unknown function | SAMN06297358_1295 | Not Available | Negative | 1610663 - 1610986 | 11519.2 |
| hypothetical protein | SAMN06297358_1296 | Not Available | Negative | 1611088 - 1611558 | 17791.3 |
| rtec protein | SAMN06297358_1297 | Not Available | Negative | 1611725 - 1612681 | 37110.2 |
| rtec protein | SAMN06297358_1298 | Not Available | Negative | 1612793 - 1613410 | 24110.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_1299 | Not Available | Positive | 1613658 - 1614341 | 25950.1 |
| hypothetical protein | SAMN06297358_1300 | Not Available | Negative | 1614365 - 1615198 | 32318.4 |
| hypothetical protein | SAMN06297358_1301 | Not Available | Positive | 1615383 - 1615766 | 14070.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_1302 | Not Available | Positive | 1615775 - 1616398 | 24267.2 |
| hypothetical protein | SAMN06297358_1303 | Not Available | Positive | 1616403 - 1616990 | 22979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

