Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamin tail domain | SAMN06297358_1274 | Not Available | Negative | 1591130 - 1592329 | 42575.9 |
| carboxypepd_reg-like domain-containing protein | SAMN06297358_1275 | Not Available | Negative | 1592355 - 1595087 | 101278.0 |
| hypothetical protein | SAMN06297358_1276 | Not Available | Negative | 1595148 - 1595501 | 13224.9 |
| hypothetical protein | SAMN06297358_1277 | Not Available | Negative | 1596161 - 1596442 | 10950.2 |
| tir domain-containing protein | SAMN06297358_1278 | Not Available | Positive | 1597192 - 1598061 | 33530.7 |
| hypothetical protein | SAMN06297358_1279 | Not Available | Positive | 1598054 - 1599142 | 42676.9 |
| helix-turn-helix | SAMN06297358_1280 | Not Available | Negative | 1599181 - 1599486 | 11411.9 |
| hypothetical protein | SAMN06297358_1281 | Not Available | Negative | 1599490 - 1599714 | 8546.36 |
| hypothetical protein | SAMN06297358_1282 | Not Available | Negative | 1599659 - 1600255 | 23055.6 |
| hypothetical protein | SAMN06297358_1283 | Not Available | Negative | 1600370 - 1600552 | 6622.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

